EnhancerDB
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  3. rs72648055[chr1:230219614]
Enhancers that have rs72648055[chr1:230219614]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs72648055[chr1:230219614]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230219606 230219620 PLAG1 JASPAR yes 36019634
chr1 230219607 230219614 SP1 TRANSFAC yes 36019636
chr1 230219607 230219621 PLAG1 JASPAR yes 36019637
Genes associated with rs72648055[chr1:230219614], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More