EnhancerDB
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  3. rs72754374[chr1:212656477]
Enhancers that have rs72754374[chr1:212656477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr1 212656151 212656660 vista5002
VISTA
Transcript factors that have rs72754374[chr1:212656477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 21378808
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 107868375
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 107868376
chr1 212655493 212657460 AR GTRD no Prostate (PC-3) 21378812
chr1 212655493 212657460 AR GTRD no Prostate (PC-3) 107868381
chr1 212655548 212657045 ZNF143 GTRD no Epithelial (MCF-7) 21378814
chr1 212655548 212657045 ZNF143 GTRD no Epithelial (MCF-7) 107868382
chr1 212655727 212656631 ZNF274 GTRD no Cervix (HeLa-S3) 21378815
chr1 212655727 212656631 ZNF274 GTRD no Cervix (HeLa-S3) 107868385
chr1 212655739 212656730 ZNF274 GTRD no Cervix (HeLa-S3) 21378816
chr1 212655739 212656730 ZNF274 GTRD no Cervix (HeLa-S3) 107868386
chr1 212655918 212656528 ZNF143 GTRD no Epithelial (MCF-7) 21378819
chr1 212655918 212656528 ZNF143 GTRD no Epithelial (MCF-7) 107868389
chr1 212656127 212656511 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107868397
chr1 212656202 212656478 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107868402
chr1 212656460 212656481 ZNF263 JASPAR yes 35128550
chr1 212656460 212656481 ZNF263 JASPAR yes 118452990
chr1 212656472 212656487 TFAP2C JASPAR yes 35128553
chr1 212656472 212656487 TFAP2C JASPAR yes 118452993
chr1 212656475 212656486 EBF1 JASPAR yes 35128554
chr1 212656475 212656486 EBF1 JASPAR yes 118452994
Genes associated with rs72754374[chr1:212656477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More