EnhancerDB
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  3. rs72754375[chr1:212656799]
Enhancers that have rs72754375[chr1:212656799]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs72754375[chr1:212656799]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212655493 212657460 AR GTRD no Prostate (PC-3) 21378812
chr1 212655493 212657460 AR GTRD no Prostate (PC-3) 107868381
chr1 212655548 212657045 ZNF143 GTRD no Epithelial (MCF-7) 21378814
chr1 212655548 212657045 ZNF143 GTRD no Epithelial (MCF-7) 107868382
chr1 212656588 212657077 ZBTB33 GTRD no Lung (A549) 107868403
chr1 212656599 212657320 ZNF274 GTRD no Blood (GM12878) 107868404
chr1 212656627 212657341 ZNF274 GTRD no Blood (GM12878) 107868405
chr1 212656641 212657094 ZNF274 GTRD no Blood (GM12878) 107868406
chr1 212656787 212656807 ESR1 JASPAR yes 35128602
chr1 212656792 212656812 ESR1 JASPAR yes 35128603
chr1 212656793 212656804 ESRRA JASPAR yes 35128604
Genes associated with rs72754375[chr1:212656799], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More