EnhancerDB
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  3. rs72817643[chr17:27479657]
Enhancers that have rs72817643[chr17:27479657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs72817643[chr17:27479657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27479646 27479661 SCRT1 JASPAR yes 53718148
chr17 27479647 27479657 ID4 JASPAR yes 53718149
chr17 27479647 27479657 TCF3 JASPAR yes 53718150
chr17 27479647 27479657 TCF4 JASPAR yes 53718151
chr17 27479648 27479657 SNAI2 JASPAR yes 53718152
chr17 27479656 27479666 TEAD4 JASPAR yes 53718154
chr17 27479656 27479668 TEAD1 JASPAR yes 53718155
chr17 27479657 27479665 TEAD3 JASPAR yes 53718156
Genes associated with rs72817643[chr17:27479657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More