EnhancerDB
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  3. rs72827901[chr17:46554456]
Enhancers that have rs72827901[chr17:46554456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs72827901[chr17:46554456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46554447 46554457 OLIG3 JASPAR yes 54587188
chr17 46554452 46554467 LEF1 JASPAR yes 54587189
chr17 46554453 46554458 ETS2 TRANSFAC yes 54587190
chr17 46554453 46554467 TCF7L2 JASPAR yes 54587191
chr17 46554455 46554462 TCF4 TRANSFAC yes 54587192
chr17 46554455 46554463 TCF4 TRANSFAC yes 54587193
chr17 46554456 46554462 LEF1 TRANSFAC yes 54587194
chr17 46554456 46554462 TCF4 TRANSFAC yes 54587195
Genes associated with rs72827901[chr17:46554456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More