EnhancerDB
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  3. rs72841790[chr5:171539272]
Enhancers that have rs72841790[chr5:171539272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs72841790[chr5:171539272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171539269 171539274 ETS2 TRANSFAC yes 67763622
chr5 171539270 171539284 POU4F1 JASPAR yes 67763623
chr5 171539270 171539286 POU4F2 JASPAR yes 67763624
chr5 171539270 171539286 POU4F3 JASPAR yes 67763625
chr5 171539271 171539287 POU4F2 JASPAR yes 67763626
chr5 171539271 171539287 POU4F3 JASPAR yes 67763627
Genes associated with rs72841790[chr5:171539272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More