EnhancerDB
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  3. rs72845178[chr5:171605969]
Enhancers that have rs72845178[chr5:171605969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr5 171605811 171606325 vista50132
VISTA
Transcript factors that have rs72845178[chr5:171605969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171605887 171607173 POLR2A UCSC Txn Factor no Conserved 108537440
chr5 171605887 171607173 POLR2A UCSC Txn Factor no Conserved 108537441
chr5 171605965 171605973 GMEB2 JASPAR yes 67771989
chr5 171605965 171605973 GMEB2 JASPAR yes 70760965
Genes associated with rs72845178[chr5:171605969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More