EnhancerDB
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  3. rs72846311[chr17:70394543]
Enhancers that have rs72846311[chr17:70394543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs72846311[chr17:70394543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70394322 70395327 ZBTB33 GTRD no Brain (SK-N-SH) 21784520
chr17 70394329 70394925 ZBTB33 GTRD no Brain (SK-N-SH) 21784521
chr17 70394338 70394605 ZNF143 GTRD no Epithelial (MCF-7) 21784522
chr17 70394349 70395431 ZBTB33 GTRD no Brain (SK-N-SH) 21784523
chr17 70394365 70395462 ZBTB33 GTRD no Brain (SK-N-SH) 21784524
chr17 70394385 70394989 ZBTB33 GTRD no Brain (SK-N-SH) 21784525
chr17 70394389 70394946 ZBTB33 GTRD no Brain (SK-N-SH) 21784526
chr17 70394416 70395351 ZBTB33 GTRD no Brain (SK-N-SH) 21784527
chr17 70394459 70395243 ZBTB33 GTRD no Brain (SK-N-SH) 21784528
chr17 70394504 70394870 ZBTB33 GTRD no Brain (SK-N-SH) 21784529
chr17 70394528 70394543 FOXP1 JASPAR yes 55783110
chr17 70394529 70394544 FOXP1 JASPAR yes 55783111
chr17 70394529 70394550 IRF1 JASPAR yes 55783112
chr17 70394530 70394545 FOXP1 JASPAR yes 55783113
chr17 70394531 70394546 FOXP1 JASPAR yes 55783114
chr17 70394537 70394549 FOXC2 JASPAR yes 55783115
chr17 70394537 70394555 NR3C1 JASPAR yes 55783116
chr17 70394543 70394553 MEOX1 JASPAR yes 55783117
chr17 70394543 70394553 MEOX2 JASPAR yes 55783118
chr17 70394543 70394553 POU6F1 JASPAR yes 55783119
Genes associated with rs72846311[chr17:70394543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More