EnhancerDB
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  3. rs72880188[chr1:31950139]
Enhancers that have rs72880188[chr1:31950139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
chr1 31950057 31950263 vista1077
VISTA
Transcript factors that have rs72880188[chr1:31950139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31949759 31950192 ZNF274 GTRD no Cervix (HeLa-S3) 107802732
chr1 31950125 31950144 CTCF JASPAR yes 27931413
chr1 31950125 31950144 CTCF JASPAR yes 118266712
Genes associated with rs72880188[chr1:31950139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More