EnhancerDB
  1. Home
  2. SNP
  3. rs72905929[chr1:52439461]
Enhancers that have rs72905929[chr1:52439461]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52426231 52441515 enh26698
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Liver Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs72905929[chr1:52439461]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52439453 52439467 FOXF2 JASPAR yes 28880479
chr1 52439453 52439468 FOXP1 JASPAR yes 28880480
chr1 52439455 52439466 FOXC1 JASPAR yes 28880481
chr1 52439455 52439467 FOXC2 JASPAR yes 28880482
chr1 52439458 52439466 FOXG1 JASPAR yes 28880483
chr1 52439458 52439466 FOXO3 JASPAR yes 28880484
Genes associated with rs72905929[chr1:52439461], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More