EnhancerDB
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  3. rs72928478[chr2:204435997]
Enhancers that have rs72928478[chr2:204435997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204433605 204453715 enh6121
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
Transcript factors that have rs72928478[chr2:204435997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204435979 204435999 RREB1 JASPAR yes 80240456
chr2 204435981 204436001 RREB1 JASPAR yes 80240458
chr2 204435983 204436003 RREB1 JASPAR yes 80240459
chr2 204435984 204436004 RREB1 JASPAR yes 80240461
chr2 204435986 204436001 FOXP1 JASPAR yes 80240462
chr2 204435987 204436008 IRF1 JASPAR yes 80240463
chr2 204435988 204436008 RREB1 JASPAR yes 80240464
chr2 204435993 204436008 FOXP1 JASPAR yes 80240465
Genes associated with rs72928478[chr2:204435997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More