EnhancerDB
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Enhancers that have rs72973009[chr19:3336804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3331365 3352459 enh17861
Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs72973009[chr19:3336804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3335227 3337737 ZNF274 GTRD no Cervix (HeLa-S3) 21838712
chr19 3335261 3337454 ZNF274 GTRD no Cervix (HeLa-S3) 21838713
chr19 3335550 3336839 TEF1 GTRD no Bone (Osteoblast) 21838715
chr19 3336361 3336837 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21838716
chr19 3336542 3337760 TCF7L2 GTRD no Colon (HCT116) 21838717
chr19 3336561 3337848 TCF7L2 GTRD no Colon (HCT116) 21838718
chr19 3336583 3337769 TCF7L2 GTRD no Colon (HCT116) 21838719
chr19 3336595 3337666 TCF7L2 GTRD no Colon (HCT116) 21838720
chr19 3336634 3337205 TCF7L2 GTRD no Colon (HCT116) 21838721
chr19 3336790 3336804 GLIS2 JASPAR yes 112120574
chr19 3336799 3336805 MAZ TRANSFAC yes 112120575
chr19 3336799 3336810 E2F6 JASPAR yes 112120576
chr19 3336803 3336816 SMAD2 JASPAR yes 112120577
Genes associated with rs72973009[chr19:3336804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More