EnhancerDB
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  3. rs72980338[chr2:234325023]
Enhancers that have rs72980338[chr2:234325023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 234316265 234341055 enh19334
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs72980338[chr2:234325023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 234325016 234325024 TBX15 JASPAR yes 81825496
chr2 234325016 234325024 TBX1 JASPAR yes 81825497
chr2 234325016 234325024 TBX4 JASPAR yes 81825498
chr2 234325016 234325024 TBX5 JASPAR yes 81825499
chr2 234325016 234325028 PKNOX1 JASPAR yes 81825500
chr2 234325016 234325028 PKNOX2 JASPAR yes 81825501
chr2 234325017 234325027 ID4 JASPAR yes 81825502
chr2 234325019 234325024 USF2 TRANSFAC yes 81825503
Genes associated with rs72980338[chr2:234325023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More