EnhancerDB
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  3. rs72990124[chr19:5003553]
Enhancers that have rs72990124[chr19:5003553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4999583 5006475 enh17876
Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Lung (PC-9) Breast Neural Stem Cells (H9) Stomach
Transcript factors that have rs72990124[chr19:5003553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5003548 5003561 SMAD2 JASPAR yes 112204817
chr19 5003551 5003561 TBR1 JASPAR yes 112204818
chr19 5003552 5003562 TBX21 JASPAR yes 112204819
chr19 5003553 5003561 MGA JASPAR yes 112204820
chr19 5003553 5003561 TBX15 JASPAR yes 112204821
chr19 5003553 5003561 TBX1 JASPAR yes 112204822
chr19 5003553 5003561 TBX4 JASPAR yes 112204823
chr19 5003553 5003561 TBX5 JASPAR yes 112204824
chr19 5003553 5003562 ZEB1 JASPAR yes 112204825
chr19 5003553 5003565 PKNOX1 JASPAR yes 112204826
chr19 5003553 5003565 TGIF1 JASPAR yes 112204827
chr19 5003553 5003566 ZBTB18 JASPAR yes 112204828
Genes associated with rs72990124[chr19:5003553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More