EnhancerDB
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  3. rs73318236[chr17:53518243]
Enhancers that have rs73318236[chr17:53518243]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs73318236[chr17:53518243]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53518223 53518243 RREB1 JASPAR yes 54851064
chr17 53518224 53518245 IRF1 JASPAR yes 54851065
chr17 53518228 53518248 RREB1 JASPAR yes 54851069
chr17 53518230 53518245 FOXP1 JASPAR yes 54851071
chr17 53518233 53518245 IRF1 JASPAR yes 54851072
chr17 53518235 53518250 FOXP1 JASPAR yes 54851074
Genes associated with rs73318236[chr17:53518243], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More