EnhancerDB
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  3. rs73411088[chr12:123555412]
Enhancers that have rs73411088[chr12:123555412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123537905 123558786 enh15079
Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs73411088[chr12:123555412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123555272 123555582 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21580187
chr12 123555272 123555582 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108066865
chr12 123555292 123555552 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21580188
chr12 123555292 123555552 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108066866
chr12 123555410 123555424 XBP1 JASPAR yes 124315806
chr12 123555412 123555417 ATF1 TRANSFAC yes 124315807
Genes associated with rs73411088[chr12:123555412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More