EnhancerDB
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  3. rs73540108[chr6:112042029]
Enhancers that have rs73540108[chr6:112042029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112040985 112061595 enh9322
Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs73540108[chr6:112042029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112042026 112042036 GSC2 JASPAR yes 104367285
chr6 112042026 112042036 GSC JASPAR yes 104367286
chr6 112042027 112042035 OTX1 JASPAR yes 104367287
chr6 112042027 112042035 OTX2 JASPAR yes 104367288
Genes associated with rs73540108[chr6:112042029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More