EnhancerDB
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  3. rs7358720[chr12:53354361]
Enhancers that have rs7358720[chr12:53354361]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs7358720[chr12:53354361]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53353582 53354407 TCF7L2 GTRD no Colon (HCT116) 21548265
chr12 53354015 53354616 ZNF143 GTRD no Epithelial (MCF-7) 21548266
chr12 53354082 53354593 ZNF143 GTRD no Epithelial (MCF-7) 21548267
chr12 53354351 53354372 REST JASPAR yes 120966562
chr12 53354352 53354371 REST JASPAR yes 120966563
Genes associated with rs7358720[chr12:53354361], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 53835525 53874946 + PCBP2 ENSG00000197111.11 53835525 481164 Spleen 0.262815 12125