EnhancerDB
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  3. rs739516[chr6:110865183]
Enhancers that have rs739516[chr6:110865183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs739516[chr6:110865183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110865173 110865191 SRF JASPAR yes 104296315
chr6 110865175 110865191 SRF JASPAR yes 104296316
chr6 110865178 110865192 GATA2 JASPAR yes 104296317
chr6 110865180 110865188 GATA3 JASPAR yes 104296318
chr6 110865180 110865188 GATA5 JASPAR yes 104296319
Genes associated with rs739516[chr6:110865183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More