EnhancerDB
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  3. rs74004025[chr17:78834877]
Enhancers that have rs74004025[chr17:78834877]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 78834696 78835167 vista26355
VISTA
Transcript factors that have rs74004025[chr17:78834877]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78834872 78834881 VENTX JASPAR yes 21316031
chr17 78834872 78834881 VENTX JASPAR yes 56286521
chr17 78834872 78834882 GSX2 JASPAR yes 21316032
chr17 78834872 78834882 GSX2 JASPAR yes 56286522
chr17 78834873 78834881 BSX JASPAR yes 21316033
chr17 78834873 78834881 BSX JASPAR yes 56286523
chr17 78834873 78834883 HOXB13 JASPAR yes 21316034
chr17 78834873 78834883 HOXD13 JASPAR yes 21316035
chr17 78834873 78834883 HOXB13 JASPAR yes 56286524
chr17 78834873 78834883 HOXD13 JASPAR yes 56286525
chr17 78834875 78834879 YY1 TRANSFAC yes 21316036
chr17 78834875 78834879 YY1 TRANSFAC yes 56286526
Genes associated with rs74004025[chr17:78834877], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More