EnhancerDB
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Enhancers that have rs74014258[chr16:28204882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs74014258[chr16:28204882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28204292 28204976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21701352
chr16 28204292 28204976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190905
chr16 28204384 28204980 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21701355
chr16 28204384 28204980 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190908
chr16 28204387 28205047 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21701356
chr16 28204387 28205047 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190909
chr16 28204433 28204953 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21701358
chr16 28204433 28204953 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190911
chr16 28204440 28204960 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21701359
chr16 28204440 28204960 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190912
chr16 28204456 28205129 SOX2 GTRD no Neural Stem Cells (H9) 108190915
chr16 28204475 28205535 POLR2A UCSC Txn Factor no Conserved 108190922
chr16 28204514 28205057 SOX2 GTRD no Neural Stem Cells (H9) 108190927
chr16 28204562 28204902 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21701373
chr16 28204562 28204902 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108190935
chr16 28204622 28205033 SOX2 GTRD no Neural Stem Cells (H9) 108190939
chr16 28204691 28205100 SOX2 GTRD no Neural Stem Cells (H9) 108190940
Genes associated with rs74014258[chr16:28204882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More