EnhancerDB
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  3. rs7404209[chr16:88279533]
Enhancers that have rs7404209[chr16:88279533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs7404209[chr16:88279533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88278356 88283448 ZNF143 GTRD no Epithelial (MCF-7) 21735620
chr16 88278561 88281077 ZNF143 GTRD no Epithelial (MCF-7) 21735621
chr16 88279178 88279554 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21735631
chr16 88279255 88279771 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735633
chr16 88279256 88279912 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21735634
chr16 88279278 88279808 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21735635
chr16 88279524 88279539 TFAP2A JASPAR yes 12270621
Genes associated with rs7404209[chr16:88279533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More