EnhancerDB
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  3. rs74060689[chr1:25360288]
Enhancers that have rs74060689[chr1:25360288]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25355194 25369035 enh149
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Thymus Stomach
chr1 25360165 25361177 vista825
VISTA
Transcript factors that have rs74060689[chr1:25360288]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25357021 25361651 POLR2A UCSC Txn Factor no Conserved 107802494
chr1 25357021 25361651 POLR2A UCSC Txn Factor no Conserved 107802495
chr1 25360275 25360294 CTCF JASPAR yes 27556275
chr1 25360275 25360294 CTCF JASPAR yes 118253158
chr1 25360279 25360288 NKX3-2 JASPAR yes 27556276
chr1 25360279 25360288 NKX3-2 JASPAR yes 118253159
chr1 25360280 25360296 NFYA JASPAR yes 27556277
chr1 25360280 25360296 NFYA JASPAR yes 118253160
chr1 25360283 25360298 NFYB JASPAR yes 27556278
chr1 25360283 25360298 NFYB JASPAR yes 118253161
Genes associated with rs74060689[chr1:25360288], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More