EnhancerDB
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  3. rs74115880[chr1:154782623]
Enhancers that have rs74115880[chr1:154782623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
chr1 154782504 154782818 vista3396
VISTA
Transcript factors that have rs74115880[chr1:154782623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154782554 154782918 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21340725
chr1 154782554 154782918 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107833385
chr1 154782616 154782630 TLX1 JASPAR yes 32313033
chr1 154782616 154782630 TLX1 JASPAR yes 118373904
chr1 154782617 154782631 TLX1 JASPAR yes 32313034
chr1 154782617 154782631 TLX1 JASPAR yes 118373905
chr1 154782622 154782638 RFX2 JASPAR yes 32313035
chr1 154782622 154782638 RFX3 JASPAR yes 32313036
chr1 154782622 154782638 RFX5 JASPAR yes 32313037
chr1 154782622 154782638 RFX2 JASPAR yes 118373906
chr1 154782622 154782638 RFX3 JASPAR yes 118373907
chr1 154782622 154782638 RFX5 JASPAR yes 118373908
Genes associated with rs74115880[chr1:154782623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More