EnhancerDB
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  3. rs74376817[chr17:39824047]
Enhancers that have rs74376817[chr17:39824047]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs74376817[chr17:39824047]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39823306 39824232 STAT3 GTRD no Blood (OCI-LY7) 108259440
chr17 39823306 39824232 STAT3 GTRD no Blood (OCI-LY7) 108259441
chr17 39823346 39824153 ZNF274 GTRD no Blood (GM12878) 21758216
chr17 39823346 39824153 ZNF274 GTRD no Blood (GM12878) 108259455
chr17 39823346 39824153 ZNF274 GTRD no Blood (GM12878) 108259456
chr17 39823392 39824087 ZNF274 GTRD no Blood (GM12878) 21758217
chr17 39823392 39824087 ZNF274 GTRD no Blood (GM12878) 108259457
chr17 39823422 39824345 ZNF274 GTRD no Blood (GM12878) 21758218
chr17 39823422 39824345 ZNF274 GTRD no Blood (GM12878) 108259458
chr17 39823422 39824345 ZNF274 GTRD no Blood (GM12878) 108259459
chr17 39824040 39824049 VENTX JASPAR yes 54270689
chr17 39824040 39824050 EN2 JASPAR yes 54270690
chr17 39824040 39824050 GBX1 JASPAR yes 54270691
chr17 39824040 39824050 GBX2 JASPAR yes 54270692
chr17 39824040 39824050 HOXB3 JASPAR yes 54270693
chr17 39824041 39824049 BARX1 JASPAR yes 54270694
chr17 39824041 39824049 EN1 JASPAR yes 54270695
chr17 39824041 39824049 ISL2 JASPAR yes 54270696
chr17 39824041 39824049 MSX1 JASPAR yes 54270697
chr17 39824041 39824049 MSX2 JASPAR yes 54270698
chr17 39824041 39824049 PDX1 JASPAR yes 54270699
chr17 39824046 39824054 EHF JASPAR yes 54270700
Genes associated with rs74376817[chr17:39824047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 39766030 39772151 - KRT16 ENSG00000186832.4 39772151 51896 Esophagus 0.310967 15834