EnhancerDB
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  3. rs74459494[chr16:85185056]
Enhancers that have rs74459494[chr16:85185056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs74459494[chr16:85185056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85185047 85185068 ZNF263 JASPAR yes 12025777
chr16 85185050 85185071 ZNF263 JASPAR yes 12025778
chr16 85185052 85186218 ZNF143 GTRD no Epithelial (MCF-7) 21720399
chr16 85185052 85186218 ZNF143 GTRD no Epithelial (MCF-7) 108213424
chr16 85185053 85185057 NFE TRANSFAC yes 12025779
chr16 85185053 85185058 GATA1 TRANSFAC yes 12025780
chr16 85185053 85185059 GATA3 JASPAR yes 12025781
chr16 85185055 85185066 E2F6 JASPAR yes 12025782
Genes associated with rs74459494[chr16:85185056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 85709804 85723679 - GINS2 ENSG00000131153.4 85723679 524748 Lung 0.223693 15132