EnhancerDB
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  3. rs74502020[chr17:53533984]
Enhancers that have rs74502020[chr17:53533984]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs74502020[chr17:53533984]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53533740 53534004 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772734
chr17 53533974 53533989 AR JASPAR yes 54853662
chr17 53533976 53533992 SOX4 JASPAR yes 54853663
chr17 53533977 53533992 SOX21 JASPAR yes 54853664
chr17 53533977 53533993 SOX4 JASPAR yes 54853665
Genes associated with rs74502020[chr17:53533984], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More