EnhancerDB
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  3. rs74616616[chr17:53662439]
Enhancers that have rs74616616[chr17:53662439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53639444 53669835 enh17231
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs74616616[chr17:53662439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53662162 53663396 ZNF274 GTRD no Bone Marrow (K562) 21772821
chr17 53662277 53662557 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772822
chr17 53662286 53662566 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21772823
chr17 53662350 53663243 ZNF274 GTRD no Bone Marrow (K562) 21772824
chr17 53662433 53662448 ZIC4 JASPAR yes 54862479
chr17 53662434 53662444 FIGLA JASPAR yes 54862480
chr17 53662434 53662444 ID4 JASPAR yes 54862481
chr17 53662434 53662444 MSC JASPAR yes 54862482
chr17 53662434 53662444 MYF6 JASPAR yes 54862483
chr17 53662434 53662444 TCF3 JASPAR yes 54862484
chr17 53662434 53662444 TCF4 JASPAR yes 54862485
chr17 53662435 53662444 SNAI2 JASPAR yes 54862486
chr17 53662435 53663125 ZNF274 GTRD no Bone Marrow (K562) 21772825
chr17 53662436 53662441 USF2 TRANSFAC yes 54862487
chr17 53662437 53663067 ZNF274 GTRD no Bone Marrow (K562) 21772826
chr17 53662438 53663225 ZNF274 GTRD no Bone Marrow (K562) 21772827
Genes associated with rs74616616[chr17:53662439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More