EnhancerDB
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  3. rs7501260[chr16:88281797]
Enhancers that have rs7501260[chr16:88281797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs7501260[chr16:88281797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88278356 88283448 ZNF143 GTRD no Epithelial (MCF-7) 21735620
chr16 88281125 88282823 ZNF143 GTRD no Epithelial (MCF-7) 21735637
chr16 88281476 88283271 ZNF274 GTRD no Cervix (HeLa-S3) 21735638
chr16 88281683 88282910 ZNF274 GTRD no Cervix (HeLa-S3) 21735639
chr16 88281702 88282922 ZNF274 GTRD no Cervix (HeLa-S3) 21735640
chr16 88281710 88282811 ZNF274 GTRD no Cervix (HeLa-S3) 21735641
chr16 88281713 88283270 ZNF274 GTRD no Cervix (HeLa-S3) 21735642
chr16 88281716 88282223 ZNF274 GTRD no Cervix (HeLa-S3) 21735643
chr16 88281767 88282798 ZNF274 GTRD no Cervix (HeLa-S3) 21735644
chr16 88281788 88281809 IRF1 JASPAR yes 12270930
chr16 88281792 88281807 PRDM1 JASPAR yes 12270931
Genes associated with rs7501260[chr16:88281797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More