EnhancerDB
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  3. rs7516305[chr1:28478178]
Enhancers that have rs7516305[chr1:28478178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28477646 28492815 enh183
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs7516305[chr1:28478178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28478170 28478190 RREB1 JASPAR yes 27746778
chr1 28478170 28478191 IRF1 JASPAR yes 27746779
chr1 28478171 28478186 FOXP1 JASPAR yes 27746780
chr1 28478172 28478187 FOXP1 JASPAR yes 27746781
chr1 28478178 28478190 FOXC2 JASPAR yes 27746782
Genes associated with rs7516305[chr1:28478178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More