EnhancerDB
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  3. rs75169080[chr5:171611198]
Enhancers that have rs75169080[chr5:171611198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs75169080[chr5:171611198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171611181 171611201 RREB1 JASPAR yes 67772694
chr5 171611182 171611202 RREB1 JASPAR yes 67772695
chr5 171611183 171611198 RUNX2 JASPAR yes 67772696
chr5 171611186 171611200 IRF7 JASPAR yes 67772697
chr5 171611186 171611201 IRF9 JASPAR yes 67772698
chr5 171611198 171611214 RFX2 JASPAR yes 67772699
chr5 171611198 171611214 RFX3 JASPAR yes 67772700
chr5 171611198 171611214 RFX4 JASPAR yes 67772701
chr5 171611198 171611214 RFX5 JASPAR yes 67772702
Genes associated with rs75169080[chr5:171611198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More