EnhancerDB
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  3. rs7516946[chr1:209606922]
Enhancers that have rs7516946[chr1:209606922]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209599449 209611412 enh12618
Bone Marrow (K562) Prostate (PC-3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr1 209606620 209606963 vista4906
VISTA
Transcript factors that have rs7516946[chr1:209606922]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209601620 209608746 POLR2A UCSC Txn Factor no Conserved 107865814
chr1 209606299 209606969 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375456
chr1 209606299 209606969 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865815
chr1 209606444 209607054 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375457
chr1 209606444 209607054 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865816
chr1 209606487 209607067 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375458
chr1 209606487 209607067 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865817
chr1 209606498 209607168 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375459
chr1 209606498 209607168 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865818
chr1 209606607 209606937 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375460
chr1 209606607 209606937 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865819
chr1 209606643 209606953 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375461
chr1 209606643 209606953 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865820
chr1 209606679 209606935 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375462
chr1 209606679 209606935 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865821
chr1 209606680 209607016 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375463
chr1 209606680 209607016 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865822
chr1 209606687 209606983 GATA3 UCSC Txn Factor no Conserved 107865823
chr1 209606703 209606953 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375465
chr1 209606703 209606953 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865825
chr1 209606704 209606964 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375466
chr1 209606704 209606964 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865826
chr1 209606804 209608167 AR GTRD no Prostate (PC-3) 21375468
chr1 209606804 209608167 AR GTRD no Prostate (PC-3) 107865828
chr1 209606912 209606926 GLIS3 JASPAR yes 34975717
chr1 209606912 209606926 GLIS3 JASPAR yes 118448521
chr1 209606914 209608339 ZNF274 GTRD no Blood (GM12878) 107865829
chr1 209606915 209606925 MZF1 JASPAR yes 34975718
chr1 209606915 209606925 MZF1 JASPAR yes 118448522
chr1 209606916 209606934 RARA JASPAR yes 34975719
chr1 209606916 209606934 RARA JASPAR yes 118448523
chr1 209606921 209606926 GATA2 JASPAR yes 34975720
chr1 209606921 209606926 GATA2 JASPAR yes 118448524
Genes associated with rs7516946[chr1:209606922], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More