EnhancerDB
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  3. rs7517653[chr1:205449081]
Enhancers that have rs7517653[chr1:205449081]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205444631 205456855 enh61954
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs7517653[chr1:205449081]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205447094 205449923 ZNF274 GTRD no Bone Marrow (K562) 107862187
chr1 205447430 205451678 ZNF143 GTRD no Epithelial (MCF-7) 21371887
chr1 205447430 205451678 ZNF143 GTRD no Epithelial (MCF-7) 107862188
chr1 205447544 205451629 TCF7L2 GTRD no Colon (HCT116) 21371892
chr1 205447544 205451629 TCF7L2 GTRD no Colon (HCT116) 107862189
chr1 205447570 205451434 ZNF274 GTRD no Bone Marrow (K562) 107862190
chr1 205447713 205451244 ZNF274 GTRD no Liver (HepG2) 107862191
chr1 205447956 205451653 TCF7L2 GTRD no Colon (HCT116) 21371894
chr1 205447956 205451653 TCF7L2 GTRD no Colon (HCT116) 107862192
chr1 205448383 205451050 ZNF274 GTRD no Bone Marrow (K562) 107862193
chr1 205448493 205449428 ZNF143 GTRD no Epithelial (MCF-7) 21371899
chr1 205448523 205450562 ZNF143 GTRD no Epithelial (MCF-7) 21371900
chr1 205448523 205450562 ZNF143 GTRD no Epithelial (MCF-7) 107862194
chr1 205448543 205450817 ZNF274 GTRD no Bone Marrow (K562) 107862195
chr1 205448631 205450853 ZNF274 GTRD no Bone Marrow (K562) 107862196
chr1 205448647 205451190 ZNF274 GTRD no Liver (HepG2) 107862197
chr1 205448715 205450842 ZNF274 GTRD no Liver (HepG2) 107862198
chr1 205448857 205449390 ZNF143 GTRD no Epithelial (MCF-7) 21371902
chr1 205448869 205451775 TCF7L2 GTRD no Colon (HCT116) 21371903
chr1 205448869 205451775 TCF7L2 GTRD no Colon (HCT116) 107862199
chr1 205448887 205450122 ZNF143 GTRD no Epithelial (MCF-7) 21371904
chr1 205448887 205450122 ZNF143 GTRD no Epithelial (MCF-7) 107862200
chr1 205448904 205449802 ZNF143 GTRD no Epithelial (MCF-7) 21371905
chr1 205448935 205451202 ZNF143 GTRD no Epithelial (MCF-7) 21371906
chr1 205448935 205451202 ZNF143 GTRD no Epithelial (MCF-7) 107862201
chr1 205448972 205451539 ZNF274 GTRD no Liver (HepG2) 107862202
chr1 205449075 205450103 AR GTRD no Prostate (PC-3) 21371907
chr1 205449075 205450103 AR GTRD no Prostate (PC-3) 107862203
chr1 205449076 205449081 GATA2 JASPAR yes 34763197
Genes associated with rs7517653[chr1:205449081], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More