EnhancerDB
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  3. rs7517988[chr1:203664005]
Enhancers that have rs7517988[chr1:203664005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203658645 203666475 enh12564
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7517988[chr1:203664005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203661217 203664886 TCF7L2 GTRD no Colon (HCT116) 21369829
chr1 203661217 203664886 TCF7L2 GTRD no Colon (HCT116) 107859340
chr1 203663985 203664006 IRF1 JASPAR yes 34657070
chr1 203663991 203664012 IRF1 JASPAR yes 34657073
chr1 203663992 203664013 IRF1 JASPAR yes 34657074
chr1 203663996 203664010 STAT1 JASPAR yes 34657075
chr1 203663996 203664011 PRDM1 JASPAR yes 34657076
chr1 203663996 203664011 STAT2 JASPAR yes 34657077
chr1 203663999 203664009 NFATC3 JASPAR yes 34657078
Genes associated with rs7517988[chr1:203664005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More