EnhancerDB
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  3. rs75253330[chr17:47816080]
Enhancers that have rs75253330[chr17:47816080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47810345 47836435 enh17206
Bone Marrow (K562) Liver (HepG2) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Pancreas Uterus Thymus Heart
Transcript factors that have rs75253330[chr17:47816080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47815444 47816092 ZNF274 GTRD no Bone Marrow (K562) 21768811
chr17 47815444 47816092 ZNF274 GTRD no Bone Marrow (K562) 108269565
chr17 47815896 47817291 TCF7L2 GTRD no Colon (HCT116) 107688232
chr17 47815896 47817291 TCF7L2 GTRD no Colon (HCT116) 108269566
chr17 47815896 47817291 TCF7L2 GTRD no Colon (HCT116) 108269567
chr17 47815911 47816578 TCF7L2 GTRD no Colon (HCT116) 107688233
chr17 47815911 47816578 TCF7L2 GTRD no Colon (HCT116) 108269568
chr17 47815931 47817485 ZNF143 GTRD no Epithelial (MCF-7) 107688234
chr17 47815931 47817485 ZNF143 GTRD no Epithelial (MCF-7) 108269569
chr17 47815931 47817485 ZNF143 GTRD no Epithelial (MCF-7) 108269570
chr17 47815934 47817377 ZNF143 GTRD no Epithelial (MCF-7) 107688235
chr17 47815934 47817377 ZNF143 GTRD no Epithelial (MCF-7) 108269571
chr17 47815934 47817377 ZNF143 GTRD no Epithelial (MCF-7) 108269572
chr17 47815999 47817353 ZNF143 GTRD no Epithelial (MCF-7) 107688236
chr17 47815999 47817353 ZNF143 GTRD no Epithelial (MCF-7) 108269573
chr17 47815999 47817353 ZNF143 GTRD no Epithelial (MCF-7) 108269574
chr17 47816039 47817460 TCF7L2 GTRD no Colon (HCT116) 107688237
chr17 47816039 47817460 TCF7L2 GTRD no Colon (HCT116) 108269575
chr17 47816059 47817393 ZNF143 GTRD no Epithelial (MCF-7) 107688238
chr17 47816059 47817393 ZNF143 GTRD no Epithelial (MCF-7) 108269576
chr17 47816066 47816081 NR2C2 JASPAR yes 54657275
chr17 47816075 47816091 SOX8 JASPAR yes 54657276
Genes associated with rs75253330[chr17:47816080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 47787694 47866542 - FAM117A ENSG00000121104.3 47866542 0 Esophagus 0.0228591 16019
chr17 46839597 46894576 - TTLL6 ENSG00000170703.11 46894576 921504 Adrenal 0.193375 16001