EnhancerDB
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  3. rs75352408[chr17:55679528]
Enhancers that have rs75352408[chr17:55679528]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs75352408[chr17:55679528]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55679524 55679528 H1TF2 TRANSFAC yes 54973927
chr17 55679524 55679528 NFE TRANSFAC yes 54973928
chr17 55679524 55679528 SRF TRANSFAC yes 54973929
chr17 55679525 55679537 POU3F1 JASPAR yes 54973930
chr17 55679525 55679537 POU3F2 JASPAR yes 54973931
chr17 55679525 55679538 POU2F2 JASPAR yes 54973932
chr17 55679526 55679535 POU3F4 JASPAR yes 54973933
chr17 55679526 55679535 POU5F1B JASPAR yes 54973934
chr17 55679527 55679534 POU2F1 TRANSFAC yes 54973935
chr17 55679527 55679534 POU2F2 TRANSFAC yes 54973936
Genes associated with rs75352408[chr17:55679528], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More