EnhancerDB
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  3. rs7540410[chr1:235443336]
Enhancers that have rs7540410[chr1:235443336]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235432005 235446995 enh999
Large Intestine Blood (T-cell) Astrocyte Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs7540410[chr1:235443336]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235443331 235443345 FOXF2 JASPAR yes 36359710
chr1 235443332 235443343 HOXD12 JASPAR yes 36359711
chr1 235443336 235443343 FOXD2 JASPAR yes 36359712
chr1 235443336 235443343 FOXI1 JASPAR yes 36359713
chr1 235443336 235443343 FOXL1 JASPAR yes 36359714
chr1 235443336 235443343 FOXO4 JASPAR yes 36359715
chr1 235443336 235443343 FOXO6 JASPAR yes 36359716
chr1 235443336 235443343 FOXP3 JASPAR yes 36359717
chr1 235443336 235443344 FOXD1 JASPAR yes 36359718
chr1 235443336 235443344 FOXG1 JASPAR yes 36359719
chr1 235443336 235443344 FOXO3 JASPAR yes 36359720
Genes associated with rs7540410[chr1:235443336], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More