EnhancerDB
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  3. rs7540495[chr1:202059329]
Enhancers that have rs7540495[chr1:202059329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs7540495[chr1:202059329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 21366717
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857734
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857735
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857736
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 21366733
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857749
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857750
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 21366737
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 107857753
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 107857754
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 21366741
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 107857760
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 107857761
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 21366754
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 107857776
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 107857777
chr1 202055378 202059488 ZNF143 GTRD no Epithelial (MCF-7) 21366770
chr1 202055378 202059488 ZNF143 GTRD no Epithelial (MCF-7) 107857794
chr1 202055378 202059488 ZNF143 GTRD no Epithelial (MCF-7) 107857795
chr1 202055397 202059453 ZNF143 GTRD no Epithelial (MCF-7) 21366771
chr1 202055397 202059453 ZNF143 GTRD no Epithelial (MCF-7) 107857796
chr1 202055397 202059453 ZNF143 GTRD no Epithelial (MCF-7) 107857797
chr1 202055581 202059404 ZNF143 GTRD no Epithelial (MCF-7) 21366777
chr1 202055581 202059404 ZNF143 GTRD no Epithelial (MCF-7) 107857802
chr1 202055618 202059392 ZNF143 GTRD no Epithelial (MCF-7) 21366780
chr1 202055618 202059392 ZNF143 GTRD no Epithelial (MCF-7) 107857805
chr1 202055723 202059518 ZBTB33 GTRD no Lung (A549) 107857811
chr1 202055981 202059502 ZBTB33 GTRD no Lung (A549) 107857835
chr1 202056230 202059570 ZNF143 GTRD no Epithelial (MCF-7) 21366805
chr1 202056230 202059570 ZNF143 GTRD no Epithelial (MCF-7) 107857843
chr1 202056259 202059472 ZNF143 GTRD no Epithelial (MCF-7) 21366806
chr1 202056259 202059472 ZNF143 GTRD no Epithelial (MCF-7) 107857845
chr1 202056343 202059375 ZNF143 GTRD no Epithelial (MCF-7) 21366815
chr1 202056343 202059375 ZNF143 GTRD no Epithelial (MCF-7) 107857856
chr1 202056358 202059481 ZNF274 GTRD no Cervix (HeLa-S3) 21366817
chr1 202056358 202059481 ZNF274 GTRD no Cervix (HeLa-S3) 107857858
chr1 202056377 202059551 ZNF143 GTRD no Epithelial (MCF-7) 21366818
chr1 202056377 202059551 ZNF143 GTRD no Epithelial (MCF-7) 107857859
chr1 202056465 202059448 ZNF143 GTRD no Epithelial (MCF-7) 21366832
chr1 202056465 202059448 ZNF143 GTRD no Epithelial (MCF-7) 107857879
chr1 202056546 202059357 ZNF143 GTRD no Epithelial (MCF-7) 21366848
chr1 202059321 202059330 THAP1 JASPAR yes 34552271
Genes associated with rs7540495[chr1:202059329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More