EnhancerDB
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  3. rs7540853[chr1:234696928]
Enhancers that have rs7540853[chr1:234696928]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234695125 234703195 enh12791
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Placenta Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs7540853[chr1:234696928]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234696914 234696930 ZNF143 JASPAR yes 36288652
chr1 234696919 234696930 RUNX1 JASPAR yes 36288653
chr1 234696919 234696931 GLI2 JASPAR yes 36288654
chr1 234696920 234696930 RUNX3 JASPAR yes 36288655
chr1 234696921 234696930 RUNX2 JASPAR yes 36288656
chr1 234696926 234696938 YY1 JASPAR yes 36288657
Genes associated with rs7540853[chr1:234696928], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More