EnhancerDB
  1. Home
  2. SNP
  3. rs7543254[chr1:16441739]
Enhancers that have rs7543254[chr1:16441739]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16434153 16452566 enh26556
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs7543254[chr1:16441739]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16439954 16443334 ZNF274 GTRD no Blood (GM12878) 107802219
chr1 16441735 16441746 NFKB1 JASPAR yes 27026200
chr1 16441738 16441748 ZNF740 JASPAR yes 27026201
Genes associated with rs7543254[chr1:16441739], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More