EnhancerDB
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  3. rs75485650[chr12:46558567]
Enhancers that have rs75485650[chr12:46558567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs75485650[chr12:46558567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46554908 46558619 ZNF274 GTRD no Cervix (HeLa-S3) 21540789
chr12 46555317 46558980 ZNF274 GTRD no Cervix (HeLa-S3) 21540811
chr12 46555417 46558588 ZNF274 GTRD no Cervix (HeLa-S3) 21540824
chr12 46556729 46559078 ZNF274 GTRD no Cervix (HeLa-S3) 21540861
chr12 46557823 46560445 P63 GTRD no Skin (Keratinocyte) 21540883
chr12 46557867 46560415 P63 GTRD no Skin (Keratinocyte) 21540884
chr12 46558318 46560418 P63 GTRD no Skin (Keratinocyte) 21540890
chr12 46558436 46560155 P63 GTRD no Skin (Keratinocyte) 21540891
chr12 46558565 46558586 IRF1 JASPAR yes 120600433
Genes associated with rs75485650[chr12:46558567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More