EnhancerDB
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  3. rs7548612[chr1:172874230]
Enhancers that have rs7548612[chr1:172874230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs7548612[chr1:172874230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172873555 172874260 ZNF143 GTRD no Epithelial (MCF-7) 21350424
chr1 172874221 172874235 SPI1 JASPAR yes 33163971
Genes associated with rs7548612[chr1:172874230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More