EnhancerDB
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  3. rs75486953[chr17:55681233]
Enhancers that have rs75486953[chr17:55681233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs75486953[chr17:55681233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55681225 55681243 NFYA JASPAR yes 54974150
chr17 55681229 55681233 H1TF2 TRANSFAC yes 54974152
chr17 55681229 55681233 NFE TRANSFAC yes 54974153
chr17 55681229 55681233 SRF TRANSFAC yes 54974154
chr17 55681232 55681238 TCF4 TRANSFAC yes 54974155
Genes associated with rs75486953[chr17:55681233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More