EnhancerDB
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  3. rs75488547[chr17:78844690]
Enhancers that have rs75488547[chr17:78844690]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs75488547[chr17:78844690]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78842730 78844893 ZNF274 GTRD no Blood (GM12878) 108307926
chr17 78842730 78844893 ZNF274 GTRD no Blood (GM12878) 108307927
chr17 78842910 78844948 ZBTB33 GTRD no Lung (A549) 108307940
chr17 78842910 78844948 ZBTB33 GTRD no Lung (A549) 108307941
chr17 78842912 78844921 TCF7L2 GTRD no Colon (HCT116) 21797445
chr17 78842912 78844921 TCF7L2 GTRD no Colon (HCT116) 108307942
chr17 78842912 78844921 TCF7L2 GTRD no Colon (HCT116) 108307943
chr17 78842919 78844853 TCF7L2 GTRD no Colon (HCT116) 21797447
chr17 78842919 78844853 TCF7L2 GTRD no Colon (HCT116) 108307945
chr17 78842919 78844853 TCF7L2 GTRD no Colon (HCT116) 108307946
chr17 78843891 78844779 ZNF274 GTRD no Blood (GM12878) 108308003
chr17 78844026 78844760 ZNF274 GTRD no Blood (GM12878) 108308005
chr17 78844034 78844811 ZNF274 GTRD no Blood (GM12878) 108308006
chr17 78844135 78844733 ZNF274 GTRD no Blood (GM12878) 108308007
chr17 78844163 78844719 ZNF274 GTRD no Blood (GM12878) 108308010
chr17 78844320 78844735 ZNF274 GTRD no Blood (GM12878) 108308012
chr17 78844680 78844692 BHLHE23 JASPAR yes 56287977
chr17 78844681 78844691 NEUROG2 JASPAR yes 56287978
chr17 78844681 78844691 OLIG1 JASPAR yes 56287979
chr17 78844683 78844697 POU1F1 JASPAR yes 56287980
chr17 78844687 78844702 HNF1A JASPAR yes 56287981
Genes associated with rs75488547[chr17:78844690], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More