EnhancerDB
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  3. rs7549940[chr1:226216195]
Enhancers that have rs7549940[chr1:226216195]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226213300 226224732 enh43161
Bone Marrow (K562) Prostate (PC-3) Large Intestine Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs7549940[chr1:226216195]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226215451 226216702 ZNF274 GTRD no Bone Marrow (K562) 21386266
chr1 226215748 226216643 ZNF274 GTRD no Bone Marrow (K562) 21386267
chr1 226215803 226216941 ZNF274 GTRD no Bone Marrow (K562) 21386268
chr1 226215853 226216537 ZNF274 GTRD no Bone Marrow (K562) 21386269
chr1 226215905 226216603 ZNF274 GTRD no Bone Marrow (K562) 21386270
chr1 226215991 226216544 ZNF274 GTRD no Bone Marrow (K562) 21386271
chr1 226215995 226216460 ZNF274 GTRD no Bone Marrow (K562) 21386272
chr1 226215998 226216471 ZNF274 GTRD no Bone Marrow (K562) 21386273
chr1 226216021 226216522 ZNF274 GTRD no Bone Marrow (K562) 21386274
chr1 226216043 226216352 ZNF274 GTRD no Bone Marrow (K562) 21386275
chr1 226216062 226216352 ZNF274 GTRD no Bone Marrow (K562) 21386276
chr1 226216078 226216496 ZNF274 GTRD no Bone Marrow (K562) 21386277
chr1 226216116 226216419 ZNF274 GTRD no Bone Marrow (K562) 21386278
chr1 226216186 226216197 SPDEF JASPAR yes 35785887
Genes associated with rs7549940[chr1:226216195], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More