EnhancerDB
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  3. rs7549945[chr1:202027659]
Enhancers that have rs7549945[chr1:202027659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 202027341 202027750 vista4592
VISTA
Transcript factors that have rs7549945[chr1:202027659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202027206 202027782 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857596
chr1 202027228 202027732 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857597
chr1 202027233 202027717 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857598
chr1 202027242 202027782 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857599
chr1 202027260 202027736 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366091
chr1 202027260 202027736 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857600
chr1 202027263 202027719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21366092
chr1 202027263 202027719 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107857601
chr1 202027264 202027774 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366093
chr1 202027264 202027774 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857602
chr1 202027265 202027720 TCF12 UCSC Txn Factor no Conserved 107857603
chr1 202027265 202027720 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857604
chr1 202027273 202027759 EP300 UCSC Txn Factor no Conserved 107857605
chr1 202027273 202027759 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857606
chr1 202027281 202027682 ZNF274 GTRD no Cervix (HeLa-S3) 21366094
chr1 202027281 202027682 ZNF274 GTRD no Cervix (HeLa-S3) 107857607
chr1 202027290 202027940 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366095
chr1 202027290 202027940 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857608
chr1 202027298 202027738 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366097
chr1 202027298 202027738 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857610
chr1 202027305 202027667 ZNF274 GTRD no Bone Marrow (K562) 21366098
chr1 202027305 202027667 ZNF274 GTRD no Bone Marrow (K562) 107857613
chr1 202027327 202027663 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366102
chr1 202027327 202027663 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857617
chr1 202027362 202027818 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366105
chr1 202027362 202027818 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857620
chr1 202027365 202027695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366106
chr1 202027365 202027695 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857621
chr1 202027371 202028051 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366107
chr1 202027371 202028051 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857622
chr1 202027415 202027699 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857624
chr1 202027483 202027847 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366108
chr1 202027483 202027847 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857625
chr1 202027498 202027674 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366109
chr1 202027498 202027674 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857626
chr1 202027499 202028149 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366110
chr1 202027499 202028149 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857627
chr1 202027512 202027888 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366111
chr1 202027512 202027888 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857628
chr1 202027532 202027825 TEF1 GTRD no Bone (Osteoblast) 107857629
chr1 202027658 202027662 H1TF2 TRANSFAC yes 34547503
chr1 202027658 202027662 NFE TRANSFAC yes 34547504
chr1 202027658 202027662 SRF TRANSFAC yes 34547505
chr1 202027658 202027662 H1TF2 TRANSFAC yes 118433820
chr1 202027658 202027662 NFE TRANSFAC yes 118433821
chr1 202027658 202027662 SRF TRANSFAC yes 118433822
Genes associated with rs7549945[chr1:202027659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More