EnhancerDB
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  3. rs7553229[chr1:212662736]
Enhancers that have rs7553229[chr1:212662736]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs7553229[chr1:212662736]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212662239 212662755 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378913
chr1 212662239 212662755 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107868582
chr1 212662729 212662739 FIGLA JASPAR yes 35129552
chr1 212662729 212662739 TCF3 JASPAR yes 35129553
chr1 212662731 212662736 USF2 TRANSFAC yes 35129554
Genes associated with rs7553229[chr1:212662736], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More