EnhancerDB
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  3. rs75546421[chr12:125092075]
Enhancers that have rs75546421[chr12:125092075]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125086525 125100115 enh2675
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs75546421[chr12:125092075]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125091871 125093132 TCF7L2 GTRD no Colon (HCT116) 21581212
chr12 125091897 125093893 TCF7L2 GTRD no Colon (HCT116) 21581213
chr12 125092066 125092076 NFIA JASPAR yes 124398117
chr12 125092067 125092076 NFIX JASPAR yes 124398118
chr12 125092069 125092081 HES7 JASPAR yes 124398120
chr12 125092074 125092085 GCM1 JASPAR yes 124398121
Genes associated with rs75546421[chr12:125092075], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More