EnhancerDB
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  3. rs7555569[chr1:40288176]
Enhancers that have rs7555569[chr1:40288176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs7555569[chr1:40288176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40288168 40288183 PRDM1 JASPAR yes 28293488
chr1 40288169 40288180 E2F6 JASPAR yes 28293489
chr1 40288170 40288185 NR2C2 JASPAR yes 28293490
chr1 40288171 40288185 RXRB JASPAR yes 28293491
chr1 40288171 40288185 RXRG JASPAR yes 28293492
chr1 40288176 40288189 NR2F1 JASPAR yes 28293493
Genes associated with rs7555569[chr1:40288176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More