EnhancerDB
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  3. rs75645745[chr1:15742568]
Enhancers that have rs75645745[chr1:15742568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15740198 15759915 enh26553
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 15742467 15743324 vista486
VISTA
Transcript factors that have rs75645745[chr1:15742568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15741010 15743090 TCF7L2 GTRD no Colon (HCT116) 107802187
chr1 15742554 15742575 REST JASPAR yes 26983778
chr1 15742554 15742575 REST JASPAR yes 118236676
chr1 15742555 15742574 REST JASPAR yes 26983779
chr1 15742555 15742574 REST JASPAR yes 118236677
chr1 15742566 15742570 H4TF2 TRANSFAC yes 26983780
chr1 15742566 15742570 H4TF2 TRANSFAC yes 118236678
Genes associated with rs75645745[chr1:15742568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 15736391 15756839 + EFHD2 ENSG00000142634.8 15736391 0 Ovary 0.146416 205